Stem-loop sequence bta-mir-2285cd

Accession

MI0038379 (change log)

Description

Bos taurus miR-2285cd stem-loop

Literature search

11 open access papers mention bta-mir-2285cd
(15 sentences)

Stem-loop

   --            ug    uug    - a 
5'   aaaaaguucguu  gguu   cugu c c
     ||||||||||||  ||||   |||| | a
3'   uuuuucaaguag  ccaa   ggua g c
   gg            gu    caa    u u 

Deep sequencing

13410 reads, 45.9 reads per million, 74 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr8: 22097434-22097493 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038379

Mature sequence bta-miR-2285cd

• Accession: MIMAT0046655
• Sequence: 38 - aacaaccuggaugaacuuuuugg - 60
• Deep sequencing: 120 reads, 53 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).