Stem-loop sequence bta-mir-2285cr-1

Accession

MI0038416 (change log)

Description

Bos taurus miR-2285cr-1 stem-loop

Literature search

11 open access papers mention bta-mir-2285cr-1
(15 sentences)

Stem-loop

   ------       c          c  --c  aa 
5'       aaaaguu guucagguuu uc   gc  g
         ||||||| |||||||||| ||   ||   
3'       uuuucaa caaguccaaa ag   ug  a
   acaguu       a          a  aua  gu 

Deep sequencing

10193 reads, 52 reads per million, 75 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr10: 37415874-37415935 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038416

Mature sequence bta-miR-2285cr

• Accession: MIMAT0046691
• Sequence: 1 - aaaaguucguucagguuucu - 20
• Deep sequencing: 11435 reads, 74 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).