Stem-loop bta-mir-2285cw-1

Accession

MI0038427

Description

Bos taurus bta-mir-2285cw-1 precursor miRNA

Literature search

11 open access papers mention bta-mir-2285cw-1
(15 sentences)

Sequence

111 reads, 1.0 reads per million, 46 experiments

AAAAGUUAGUUCAGGUUUUUCUauaacaucuuagAAAAACCCAGACAAACUUUUUgg
(((((((.(((..((((((((((........))))))))))..))).)))))))...

Structure

---       A   CA          uaa 
   AAAAGUU GUU  GGUUUUUCUa   c
   ||||||| |||  ||||||||||    
   UUUUCAA CAG  CCAAAAAgau   a
ggU       A   AC          ucu 

Annotation confidence Medium

Genome context

12: 66702801-66702857 [+]

Mature bta-miR-2285cw-5p

• Accession: MIMAT0046702
• Description: Bos taurus bta-miR-2285cw-5p mature miRNA
• Sequence: 1 - AAAAGUUAGUUCAGGUUUUUCU - 22
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285cw-1-3p

• Accession: MIMAT0051176
• Description: Bos taurus bta-miR-2285cw-1-3p mature miRNA
• Sequence: 35 - AAAAACCCAGACAAACUUUUU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884