Stem-loop sequence bta-mir-2285df

Accession

MI0038455 (change log)

Description

Bos taurus miR-2285df stem-loop

Literature search

11 open access papers mention bta-mir-2285df
(15 sentences)

Stem-loop

   --auu    ca  ug        c    c 
5'      gguu  uu  gguuuuuc auaa a
        ||||  ||  |||||||| ||||  
3'      ucag  aa  ccaaaaag uauu u
   gguuu    ac  gu        -    c 

Deep sequencing

84 reads, 4 reads per million, 25 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr13: 43281524-43281580 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038455

Mature sequence bta-miR-2285df

• Accession: MIMAT0046729
• Sequence: 36 - aaaaaccugaacagacuuuugg - 57
• Deep sequencing: 82 reads, 24 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).