Stem-loop sequence bta-mir-2285dl-2

Accession

MI0038483 (change log)

Description

Bos taurus miR-2285dl-2 stem-loop

Literature search

11 open access papers mention bta-mir-2285dl-2
(15 sentences)

Stem-loop

   --au      g c       ug  ---   a 
5'     aaaguu a ucagguu  cc   cau u
       |||||| | |||||||  ||   ||| g
3'     uuucaa u aguccaa  gg   gug a
   gguu      g a       ua  aca   u 

Deep sequencing

4505 reads, 33.3 reads per million, 72 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr13: 21882960-21883019 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038483

Mature sequence bta-miR-2285dl-3p

• Accession: MIMAT0046756
• Sequence: 39 - auaaccugaaugaacuuuuugg - 60
• Deep sequencing: 9065 reads, 73 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).