miRBase entry: mco-bantam

Stem-loop mco-bantam


Accession
MI0038498
Description
Mesocestoides corti mco-bantam precursor miRNA


Sequence

cggcuuaccucgcguucugagagcucaaguccccgccaccucugucgggacuuugacaagccaucUGAGAUCGCGAUUAAAGCUGAU
((((((...(((((.(((.((((((((((((((.((.......)).))))).))))...))..))).))).)))))...))))))..

Structure
--      acc     u   g   --  ---    -     c  ca 
  cggcuu   ucgcg ucu aga  gc   ucaa guccc gc  c
  ||||||   ||||| ||| |||  ||   |||| ||||| ||  c
  GUCGAA   AGCGC AGA Ucu  cg   aguu caggg ug  u
UA      AUU     U   G   ac  aac    u     c  uc 


Annotation confidence Not enough data
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Genome context
LM531317.1: 11903-11989 [-]

Database links

Mature mco-bantam-3p

Accession MIMAT0046772
Description Mesocestoides corti mco-bantam-3p mature miRNA
Sequence 66 - UGAGAUCGCGAUUAAAGCUGAU - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27544036
    Identification and profiling of microRNAs in two developmental stages of the model cestode parasite Mesocestoides corti
    "Basika T, Macchiaroli N, Cucher M, Espinola S, Kamenetzky L, Zaha A, Rosenzvit M, Ferreira HB"
    "Mol Biochem Parasitol (2016) 210:37-49