miRBase entry: mco-mir-2b

Stem-loop mco-mir-2b


Accession
MI0038502
Description
Mesocestoides corti mco-mir-2b precursor miRNA


Sequence

GUCCCAAGGGGUAGUGGUCUAcacugacuuuuuguaucacagcccugcuugggac
((((((((((((.(((((..(((.........)))))))).))))..))))))))

Structure
        --    A     CU   cug 
GUCCCAAG  GGGU GUGGU  Aca   a
||||||||  |||| |||||  |||   c
caggguuc  cccg cacua  ugu   u
        gu    a     --   uuu 


Annotation confidence Not enough data
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Genome context
LM530374.1: 44244-44298 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mco-mir-2b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mco-miR-2b-3p

Accession MIMAT0046776
Description Mesocestoides corti mco-miR-2b-3p mature miRNA
Sequence 1 - GUCCCAAGGGGUAGUGGUCUA - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27544036
    Identification and profiling of microRNAs in two developmental stages of the model cestode parasite Mesocestoides corti
    "Basika T, Macchiaroli N, Cucher M, Espinola S, Kamenetzky L, Zaha A, Rosenzvit M, Ferreira HB"
    "Mol Biochem Parasitol (2016) 210:37-49