miRBase entry: mco-mir-7b

Stem-loop mco-mir-7b

Accession

MI0038505

Description

Mesocestoides corti mco-mir-7b precursor miRNA

Sequence

UGGAAGACUUGUGAUUAGGUUGUUAcgcaaaauacguuuugucaucaucaaaaugcgaaacaugcaccuauuaacaacugucacggucuuccaagg
(((((((((.(((((..((((((((..........((((((.(((.......)))))))))..........))))))))))))))))))))))...

Structure

---         U     UA        cgcaaaauac      u   ca 
   UGGAAGACU GUGAU  GGUUGUUA          guuuug cau  u
   ||||||||| |||||  ||||||||          |||||| |||  c
   accuucugg cacug  ucaacaau          caaagc gua  a
gga         -     --        uauccacgua      -   aa

Annotation confidence Not enough data

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Genome context

LM530561.1: 17319-17414 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mco-mir-7b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mco-miR-7b-3p

Accession	MIMAT0046779
Description	Mesocestoides corti mco-miR-7b-3p mature miRNA
Sequence	1 - UGGAAGACUUGUGAUUAGGUUGUUA - 25
Evidence	experimental Illumina [1]

References

PubMed ID: 27544036
Identification and profiling of microRNAs in two developmental stages of the model cestode parasite Mesocestoides corti
"Basika T, Macchiaroli N, Cucher M, Espinola S, Kamenetzky L, Zaha A, Rosenzvit M, Ferreira HB"
"Mol Biochem Parasitol (2016) 210:37-49