miRBase entry: cpo-let-7i

Stem-loop cpo-let-7i


Accession
MI0038550
Description
Cavia porcellus cpo-let-7i precursor miRNA


Sequence

UGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaaCUGCGCAAGCUACUGCCUUGCU
.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))...

Structure
--U                 U   --------  u     ugu 
   GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
   ||||||||||||||||| |||        || |||||   a
   UUCCGUCAUCGAACGCG Caa        uc gcccg   c
UCG                 U   uagaggug  -     uua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
DS562864.1: 35660320-35660397 [-]

Database links

Mature cpo-let-7i-5p

Accession MIMAT0046833
Description Cavia porcellus cpo-let-7i-5p mature miRNA
Sequence 1 - UGAGGUAGUAGUUUGUGCUGUU - 22
Evidence experimental
Illumina [1]

Mature cpo-let-7i-3p

Accession MIMAT0046834
Description Cavia porcellus cpo-let-7i-3p mature miRNA
Sequence 57 - CUGCGCAAGCUACUGCCUUGCU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344