miRBase entry: cpo-mir-21

Stem-loop cpo-mir-21


Accession
MI0038573
Description
Cavia porcellus cpo-mir-21 precursor miRNA


Sequence

UAGCUUAUCAGACUGAUGUUGACUguugaaucucauggCAACAGCAGUCGAUGGGCUGUC
(((((((((.(((((.(((((.((((.((...))))))))))).))))))))))))))..

Structure
--         A     A     A    u  a 
  UAGCUUAUC GACUG UGUUG CUgu ga  
  ||||||||| ||||| ||||| |||| || u
  GUCGGGUAG CUGAC ACAAC ggua cu  
CU         -     G     -    -  c 


Annotation confidence Not enough data
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Genome context
DS562887.1: 7682937-7682996 [+]

Database links

Mature cpo-miR-21-5p

Accession MIMAT0046872
Description Cavia porcellus cpo-miR-21-5p mature miRNA
Sequence 1 - UAGCUUAUCAGACUGAUGUUGACU - 24
Evidence experimental
Illumina [1]

Mature cpo-miR-21-3p

Accession MIMAT0046873
Description Cavia porcellus cpo-miR-21-3p mature miRNA
Sequence 39 - CAACAGCAGUCGAUGGGCUGUC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344