miRBase entry: cpo-mir-130a

Stem-loop cpo-mir-130a


Accession
MI0038633
Description
Cavia porcellus cpo-mir-130a precursor miRNA


Sequence

GCUCUUUUCACAUUGUGCUACUgucugcacucgucacaagCAGUGCAAUGUUAAAAGGGCAU
((((((((.((((((((((.((....((....))....)).)))))))))).))))))))..

Structure
--        C          A  gucu  a 
  GCUCUUUU ACAUUGUGCU CU    gc c
  |||||||| |||||||||| ||    ||  
  CGGGAAAA UGUAACGUGA ga    ug u
UA        U          C  acac  c 


Annotation confidence Not enough data
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Genome context
DS562941.1: 2921906-2921967 [-]

Database links

Mature cpo-miR-130a-5p

Accession MIMAT0046980
Description Cavia porcellus cpo-miR-130a-5p mature miRNA
Sequence 1 - GCUCUUUUCACAUUGUGCUACU - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-130a-3p

Accession MIMAT0046981
Description Cavia porcellus cpo-miR-130a-3p mature miRNA
Sequence 41 - CAGUGCAAUGUUAAAAGGGCAU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344