miRBase entry: cpo-mir-135b

Stem-loop cpo-mir-135b


Accession
MI0038642
Description
Cavia porcellus cpo-mir-135b precursor miRNA


Sequence

UAUGGCUUUUCAUUCCUAUGUGAuugcuguuccaaauucAUGUAGGGCUAAAAGCCAUGGG
((((((((((...(((((((((((((......)))..))))))))))..))))))))))..

Structure
--          CAU          --   cu 
  UAUGGCUUUU   UCCUAUGUGA  uug  g
  ||||||||||   ||||||||||  |||   
  GUACCGAAAA   GGGAUGUAcu  aac  u
GG          -UC          ua   cu 


Annotation confidence Not enough data
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Genome context
DS562867.1: 17315920-17315980 [+]

Database links

Mature cpo-miR-135b-5p

Accession MIMAT0046995
Description Cavia porcellus cpo-miR-135b-5p mature miRNA
Sequence 1 - UAUGGCUUUUCAUUCCUAUGUGA - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-135b-3p

Accession MIMAT0046996
Description Cavia porcellus cpo-miR-135b-3p mature miRNA
Sequence 40 - AUGUAGGGCUAAAAGCCAUGGG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344