miRBase entry: cpo-mir-190b

Stem-loop cpo-mir-190b


Accession
MI0038678
Description
Cavia porcellus cpo-mir-190b precursor miRNA


Sequence

UGAUAUGUUUGAUAUUGGGUUGuuuaauuaggaaccaACUAAAUGUCAAACAUAUUCUU
.(((((((((((((((.((((((((......))).))))).)))))))))))))))...

Structure
--U               G     -   aa 
   GAUAUGUUUGAUAUU GGUUG uuu  u
   ||||||||||||||| ||||| |||   
   UUAUACAAACUGUAA UCAac aag  u
UUC               A     c   ga 


Annotation confidence Not enough data
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Genome context
DS562865.1: 15118648-15118706 [-]

Database links

Mature cpo-miR-190b-5p

Accession MIMAT0047064
Description Cavia porcellus cpo-miR-190b-5p mature miRNA
Sequence 1 - UGAUAUGUUUGAUAUUGGGUUG - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-190b-3p

Accession MIMAT0047065
Description Cavia porcellus cpo-miR-190b-3p mature miRNA
Sequence 38 - ACUAAAUGUCAAACAUAUUCUU - 59
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344