miRBase entry: cpo-mir-206

Stem-loop cpo-mir-206

Accession

MI0038699

Description

Cavia porcellus cpo-mir-206 precursor miRNA

Sequence

ACAUGCUUCUUUAUAUCCCCAUAgggauuacuuugcuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..((((((.((.....)).)))))).))))))))))))))))..

Structure

--                CC      g  u 
  ACAUGCUUCUUUAUAU  CCAUAg ga u
  ||||||||||||||||  |||||| || a
  UGUGUGAAGGAAUGUA  GGUauc uu c
GG                -A      g  u

Annotation confidence Not enough data

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Genome context

DS562867.1: 49857882-49857941 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-206

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-206-5p

Accession	MIMAT0047103
Description	Cavia porcellus cpo-miR-206-5p mature miRNA
Sequence	1 - ACAUGCUUCUUUAUAUCCCCAUA - 23
Evidence	experimental Illumina [1]

Mature cpo-miR-206-3p

Accession	MIMAT0047104
Description	Cavia porcellus cpo-miR-206-3p mature miRNA
Sequence	39 - UGGAAUGUAAGGAAGUGUGUGG - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344