miRBase entry: cpo-mir-323a

Stem-loop cpo-mir-323a


Accession
MI0038725
Description
Cavia porcellus cpo-mir-323a precursor miRNA


Sequence

AGGUGGUCCGUGGCGCGUUCGcuuuuuuuauggcgCACAUUACACGGUCGACCUCU
((((.(.(((((..(.((.((((........)))).)).)..))))).).))))..

Structure
--    G U     GC C  U    uuu 
  AGGU G CCGUG  G GU CGcu   u
  |||| | |||||  | || ||||    
  UCCA C GGCAC  U CA gcgg   u
UC    G U     AU A  C    uau 


Annotation confidence Not enough data
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Genome context
DS562966.1: 1085632-1085687 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from cpo-mir-323a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-323a-5p

Accession MIMAT0047154
Description Cavia porcellus cpo-miR-323a-5p mature miRNA
Sequence 1 - AGGUGGUCCGUGGCGCGUUCG - 21
Evidence experimental
Illumina [1]

Mature cpo-miR-323a-3p

Accession MIMAT0047155
Description Cavia porcellus cpo-miR-323a-3p mature miRNA
Sequence 36 - CACAUUACACGGUCGACCUCU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344