miRBase entry: cpo-mir-335

Stem-loop cpo-mir-335


Accession
MI0038733
Description
Cavia porcellus cpo-mir-335 precursor miRNA


Sequence

UCAAGAGCAAUAACGAAAAAUGuuugucauaaaccgUUUUUCAUUAUUGCUCCUGACC
(((.(((((((((.((((((((.((......)).)))))))).))))))))).)))..

Structure
--   A         C        u  gu 
  UCA GAGCAAUAA GAAAAAUG uu  c
  ||| ||||||||| |||||||| ||   
  AGU CUCGUUAUU CUUUUUgc aa  a
CC   C         A        c  au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
DS562866.1: 50759609-50759666 [+]

Database links

Mature cpo-miR-335-5p

Accession MIMAT0047170
Description Cavia porcellus cpo-miR-335-5p mature miRNA
Sequence 1 - UCAAGAGCAAUAACGAAAAAUG - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-335-3p

Accession MIMAT0047171
Description Cavia porcellus cpo-miR-335-3p mature miRNA
Sequence 37 - UUUUUCAUUAUUGCUCCUGACC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344