miRBase entry: cpo-mir-345

Stem-loop cpo-mir-345


Accession
MI0038739
Description
Cavia porcellus cpo-mir-345 precursor miRNA


Sequence

GCUGACUCCCAGUCCAGUGCUcgugaucccagccgggCCCUGAACUAGGGGUCUGGAG
...((((((.(((.(((.(((((.(.......)))))).))).))).)))))).....

Structure
--GCU      C   C   U     u au 
     GACUCC AGU CAG GCUcg g  c
     |||||| ||| ||| ||||| |  c
     CUGGGG UCA GUC Cgggc c  c
GAGGU      A   A   C     - ga 


Annotation confidence Not enough data
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Genome context
DS562966.1: 6113-6170 [+]

Database links

Mature cpo-miR-345-5p

Accession MIMAT0047182
Description Cavia porcellus cpo-miR-345-5p mature miRNA
Sequence 1 - GCUGACUCCCAGUCCAGUGCU - 21
Evidence experimental
Illumina [1]

Mature cpo-miR-345-3p

Accession MIMAT0047183
Description Cavia porcellus cpo-miR-345-3p mature miRNA
Sequence 38 - CCCUGAACUAGGGGUCUGGAG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344