miRBase entry: cpo-mir-376c

Stem-loop cpo-mir-376c


Accession
MI0038755
Description
Cavia porcellus cpo-mir-376c precursor miRNA


Sequence

GUGGAUAUUCCUUCAAUGUUUAugucauuuaugguuaAACACAGAGGAAAUUCCAUGU
(((((..((((((...((((((..(((....))).))))))..))))))..)))))..

Structure
--     UA      CAA      ug   u 
  GUGGA  UUCCUU   UGUUUA  uca u
  |||||  ||||||   ||||||  |||  
  UACCU  AAGGAG   ACAAau  ggu u
UG     UA      -AC      -u   a 


Annotation confidence Not enough data
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Genome context
DS562966.1: 1095062-1095119 [+]
Clustered miRNAs
20 other miRNAs are < 10 kb from cpo-mir-376c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-376c-5p

Accession MIMAT0047213
Description Cavia porcellus cpo-miR-376c-5p mature miRNA
Sequence 1 - GUGGAUAUUCCUUCAAUGUUUA - 22
Evidence not_experimental

Mature cpo-miR-376c-3p

Accession MIMAT0047214
Description Cavia porcellus cpo-miR-376c-3p mature miRNA
Sequence 38 - AACACAGAGGAAAUUCCAUGU - 58
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344