miRBase entry: cpo-mir-376d

Stem-loop cpo-mir-376d


Accession
MI0038756
Description
Cavia porcellus cpo-mir-376d precursor miRNA


Sequence

GUGGAUUUUCCUCCUAUGAUUAugcauuggcugguuaAUCAUACGGGAAAAUCCACGU
((((((((((((..((((((((..((.....))..)))))))).))))))))))))..

Structure
--            CC        ug  u 
  GUGGAUUUUCCU  UAUGAUUA  ca u
  ||||||||||||  ||||||||  || g
  CACCUAAAAGGG  AUACUAau  gu g
UG            -C        ug  c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
DS562966.1: 1095388-1095445 [+]
Clustered miRNAs
20 other miRNAs are < 10 kb from cpo-mir-376d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-376d-5p

Accession MIMAT0047215
Description Cavia porcellus cpo-miR-376d-5p mature miRNA
Sequence 1 - GUGGAUUUUCCUCCUAUGAUUA - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-376d-3p

Accession MIMAT0047216
Description Cavia porcellus cpo-miR-376d-3p mature miRNA
Sequence 38 - AUCAUACGGGAAAAUCCACGU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344