miRBase entry: cpo-mir-383

Stem-loop cpo-mir-383


Accession
MI0038763
Description
Cavia porcellus cpo-mir-383 precursor miRNA


Sequence

AGAUCAGAAGGUGAUUGUGGCUuuggguagauauuaaucagCCACAACACUGCCUGGUCAGA
.((((((..((((.((((((((...(((........)))))))))))))))..))))))...

Structure
--A      AA    A        uug   aga 
   GAUCAG  GGUG UUGUGGCU   ggu   u
   ||||||  |||| ||||||||   |||    
   CUGGUC  UCAC AACACCga   cua   a
AGA      CG    -        ---   auu 


Annotation confidence Not enough data
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Genome context
DS562891.1: 1425337-1425398 [-]

Database links

Mature cpo-miR-383-5p

Accession MIMAT0047229
Description Cavia porcellus cpo-miR-383-5p mature miRNA
Sequence 1 - AGAUCAGAAGGUGAUUGUGGCU - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-383-3p

Accession MIMAT0047230
Description Cavia porcellus cpo-miR-383-3p mature miRNA
Sequence 42 - CCACAACACUGCCUGGUCAGA - 62
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344