miRBase entry: cpo-mir-892

Stem-loop cpo-mir-892

Accession

MI0038764

Description

Cavia porcellus cpo-mir-892 precursor miRNA

Sequence

cacguccUAUUCAGAAUGGCCUUGGUCAuuuggauuauauguCACCAAGGUCUUUCUGAGUAGAauagg
......((((((((((.((((((((((((.........)))..))))))))).))))))))))......

Structure

cacguc          U         --   uug 
      cUAUUCAGAA GGCCUUGGU  CAu   g
      |||||||||| |||||||||  |||   a
      GAUGAGUCUU CUGGAACCA  gua   u
ggauaA          U         Cu   uau

Annotation confidence Not enough data

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Genome context

DS562939.1: 3931986-3932054 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-892

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-892-5p

Accession	MIMAT0047231
Description	Cavia porcellus cpo-miR-892-5p mature miRNA
Sequence	8 - UAUUCAGAAUGGCCUUGGUCA - 28
Evidence	experimental Illumina [1]

Mature cpo-miR-892-3p

Accession	MIMAT0047232
Description	Cavia porcellus cpo-miR-892-3p mature miRNA
Sequence	43 - CACCAAGGUCUUUCUGAGUAGA - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344