miRBase entry: cpo-mir-410

Stem-loop cpo-mir-410


Accession
MI0038766
Description
Cavia porcellus cpo-mir-410 precursor miRNA


Sequence

AGGUUGUCUGUGAUGAGUUCGcuuuauuaaugacgAAUAUAACACAGAUGGCCUGU
((((((((((((.((.((((((.........).))))).)).))))))))))))..

Structure
--            A  A     - uuu 
  AGGUUGUCUGUG UG GUUCG c   a
  |||||||||||| || ||||| |   u
  UCCGGUAGACAC AU UAAgc g   u
UG            A  A     a uaa 


Annotation confidence Not enough data
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Genome context
DS562966.1: 1117656-1117711 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from cpo-mir-410
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-410-5p

Accession MIMAT0047235
Description Cavia porcellus cpo-miR-410-5p mature miRNA
Sequence 1 - AGGUUGUCUGUGAUGAGUUCG - 21
Evidence experimental
Illumina [1]

Mature cpo-miR-410-3p

Accession MIMAT0047236
Description Cavia porcellus cpo-miR-410-3p mature miRNA
Sequence 36 - AAUAUAACACAGAUGGCCUGU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344