miRBase entry: cpo-mir-411

Accession

MI0038767

Description

Cavia porcellus cpo-mir-411 precursor miRNA

Sequence

UAGUAGACCGUAUAGCGUACGcuuuaucugugacgUAUGUAACACGGUCCACUAAC
((((.((((((...((((((((.........).)))))))...)))))).))))..

Structure

--    A      AUA       - uuu 
  UAGU GACCGU   GCGUACG c   a
  |||| ||||||   ||||||| |   u
  AUCA CUGGCA   UGUAUgc g   c
CA    C      CAA       a ugu

Annotation confidence Not enough data

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Genome context

DS562966.1: 1083271-1083326 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from cpo-mir-411

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0047237
Description	Cavia porcellus cpo-miR-411-5p mature miRNA
Sequence	1 - UAGUAGACCGUAUAGCGUACG - 21
Evidence	experimental Illumina [1]

Accession	MIMAT0047238
Description	Cavia porcellus cpo-miR-411-3p mature miRNA
Sequence	36 - UAUGUAACACGGUCCACUAAC - 56
Evidence	experimental Illumina [1]

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344