miRBase entry: cpo-mir-432

Stem-loop cpo-mir-432


Accession
MI0038774
Description
Cavia porcellus cpo-mir-432 precursor miRNA


Sequence

UCUUGGAGUAGGUCAUUGGGUGGauccucuauuucccuaugcgggccACUGGAUGGCUCCUCCAUGUCU
...(((((..(((((((.(((((.(((..(((......))).)))))))).))))))).))))).....

Structure
--UCU     UA       G     a   uc   uu 
     UGGAG  GGUCAUU GGUGG ucc  uau  c
     |||||  ||||||| ||||| |||  |||   
     ACCUC  UCGGUAG UCAcc ggg  gua  c
UCUGU     -C       G     -   -c   uc 


Annotation confidence Not enough data
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Genome context
DS562966.1: 955129-955197 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from cpo-mir-432
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-432-5p

Accession MIMAT0047251
Description Cavia porcellus cpo-miR-432-5p mature miRNA
Sequence 1 - UCUUGGAGUAGGUCAUUGGGUGG - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-432-3p

Accession MIMAT0047252
Description Cavia porcellus cpo-miR-432-3p mature miRNA
Sequence 48 - ACUGGAUGGCUCCUCCAUGUCU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344