miRBase entry: cpo-mir-496

Accession

MI0038796

Description

Cavia porcellus cpo-mir-496 precursor miRNA

Sequence

GGUUGUCCAUGGUGUGUUCAUUuuauuuaugaUGAGUAUUACAUGGCCAAUCUC
(((((.(((((..(((((((((........)))))))))..))))).)))))..

Structure

--     U     GU         uua 
  GGUUG CCAUG  GUGUUCAUU   u
  ||||| |||||  |||||||||    
  CUAAC GGUAC  UAUGAGUag   u
CU     C     AU         uau

Annotation confidence Not enough data

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Genome context

DS562966.1: 1113040-1113093 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from cpo-mir-496

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0047293
Description	Cavia porcellus cpo-miR-496-5p mature miRNA
Sequence	1 - GGUUGUCCAUGGUGUGUUCAUU - 22
Evidence	not_experimental

Accession	MIMAT0047294
Description	Cavia porcellus cpo-miR-496-3p mature miRNA
Sequence	33 - UGAGUAUUACAUGGCCAAUCUC - 54
Evidence	experimental Illumina [1]

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344