miRBase entry: cpo-mir-497

Stem-loop cpo-mir-497

Accession

MI0038797

Description

Cavia porcellus cpo-mir-497 precursor miRNA

Sequence

CAGCAGCACACUGUGGUUUGUAcggcacuguggccacgucCAAACCACACUGUGGUGUUAGAgcgaggguggg
.((((.((((.(((((((((.(((((......)))..)).))))))))).)))).))))..............

Structure

-------------C    G    C         U  --   ac 
              AGCA CACA UGUGGUUUG Ac  ggc  u
              |||| |||| ||||||||| ||  |||   
              UUGU GUGU ACACCAAAC ug  ccg  g
gggugggagcgAGA    G    C         c  ca   gu

Annotation confidence Not enough data

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Genome context

DS562916.1: 9616778-9616850 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-497

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-497-5p

Accession	MIMAT0047295
Description	Cavia porcellus cpo-miR-497-5p mature miRNA
Sequence	1 - CAGCAGCACACUGUGGUUUGUA - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-497-3p

Accession	MIMAT0047296
Description	Cavia porcellus cpo-miR-497-3p mature miRNA
Sequence	41 - CAAACCACACUGUGGUGUUAGA - 62
Evidence	not_experimental

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344