Stem-loop cpo-mir-653

Accession

MI0038828

Description

Cavia porcellus cpo-mir-653 precursor miRNA

Sequence

UUGAAACACUCUCUACUGAACCaggcuccacaccaagUUCACUGGAGUUUGUUUCAGUA
((((((((..(((((.(((((..((.......))..))))).)))))..))))))))..

Structure

--        CU     C     Ca  cu 
  UUGAAACA  CUCUA UGAAC  gg  c
  ||||||||  ||||| |||||  ||  c
  GACUUUGU  GAGGU ACUUg  cc  a
AU        UU     C     aa  ac 

Annotation confidence Not enough data

Genome context

DS562866.1: 25053804-25053862 [-]

Mature cpo-miR-653-5p

• Accession: MIMAT0047357
• Description: Cavia porcellus cpo-miR-653-5p mature miRNA
• Sequence: 1 - UUGAAACACUCUCUACUGAACC - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-653-3p

• Accession: MIMAT0047358
• Description: Cavia porcellus cpo-miR-653-3p mature miRNA
• Sequence: 38 - UUCACUGGAGUUUGUUUCAGUA - 59
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344