miRBase entry: cpo-mir-655

Stem-loop cpo-mir-655

Accession

MI0038830

Description

Cavia porcellus cpo-mir-655 precursor miRNA

Sequence

AGAGGUUAUCCGUGAUAUGUUCgcuucauucaucaugaAUAAUACAUGGUUAACCUCUUU
((((((((.(((((...((((((............))))))...))))).))))))))..

Structure

--        U     AUA      cuuca 
  AGAGGUUA CCGUG   UGUUCg     u
  |||||||| |||||   ||||||      
  UCUCCAAU GGUAC   AUAagu     u
UU        U     AUA      acuac

Annotation confidence Not enough data

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Genome context

DS562966.1: 1102750-1102809 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cpo-mir-655

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-655-5p

Accession	MIMAT0047361
Description	Cavia porcellus cpo-miR-655-5p mature miRNA
Sequence	1 - AGAGGUUAUCCGUGAUAUGUUC - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-655-3p

Accession	MIMAT0047362
Description	Cavia porcellus cpo-miR-655-3p mature miRNA
Sequence	39 - AUAAUACAUGGUUAACCUCUUU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344