miRBase entry: cpo-mir-758

Stem-loop cpo-mir-758


Accession
MI0038840
Description
Cavia porcellus cpo-mir-758 precursor miRNA


Sequence

AUGGUUGACCAGAGAGCACACGcuauauuugugccgUUUGUGACCUGGUCCACUAACC
.((((.((((((.(.(((.(((.(((....))).))).)))..))))))).))))...

Structure
--A    U      A -A   C   c   a 
   UGGU GACCAG G  GCA ACG uau u
   |||| |||||| |  ||| ||| |||  
   AUCA CUGGUC C  UGU Ugc gug u
CCA    C      - AG   U   c   u 


Annotation confidence Not enough data
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Genome context
DS562966.1: 1085914-1085971 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from cpo-mir-758
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-758-5p

Accession MIMAT0047381
Description Cavia porcellus cpo-miR-758-5p mature miRNA
Sequence 1 - AUGGUUGACCAGAGAGCACACG - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-758-3p

Accession MIMAT0047382
Description Cavia porcellus cpo-miR-758-3p mature miRNA
Sequence 37 - UUUGUGACCUGGUCCACUAACC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344