Stem-loop cpo-mir-1298

Accession

MI0038858

Description

Cavia porcellus cpo-mir-1298 precursor miRNA

Sequence

UUCAUUCAGAUGUUCAGAUGUAuccaaguaccuaguuauuuggcaauaaauaCAUCUGGGCAACUGAUUGAACU
((((.((((.((((((((((((((((((((......)))))))......))))))))))))).)))).))))..

Structure

--    U    A             ------       cc 
  UUCA UCAG UGUUCAGAUGUAu      ccaagua  u
  |||| |||| |||||||||||||      |||||||   
  AAGU AGUC ACGGGUCUACaua      gguuuau  a
UC    U    A             aauaac       ug 

Annotation confidence Not enough data

Genome context

DS562901.1: 5210415-5210488 [-]

Mature cpo-miR-1298-5p

• Accession: MIMAT0047417
• Description: Cavia porcellus cpo-miR-1298-5p mature miRNA
• Sequence: 1 - UUCAUUCAGAUGUUCAGAUGUA - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-1298-3p

• Accession: MIMAT0047418
• Description: Cavia porcellus cpo-miR-1298-3p mature miRNA
• Sequence: 53 - CAUCUGGGCAACUGAUUGAACU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344