miRBase entry: cpo-mir-1379

Stem-loop cpo-mir-1379


Accession
MI0038861
Description
Cavia porcellus cpo-mir-1379 precursor miRNA


Sequence

UCAGGCUCUCAGCCCGAGCCguguucuucagacgggCACGGGCUGCAGCGCCAACGC
...(((.(((((((((.(((.((((.....))))))).))))))).)).))).....

Structure
--UCA   U  -       A   g    c 
     GGC CU CAGCCCG GCC uguu u
     ||| || ||||||| ||| |||| u
     CCG GA GUCGGGC Cgg gcag c
CGCAA   C  C       A   -    a 


Annotation confidence Not enough data
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Genome context
DS562868.1: 2582941-2582997 [+]

Database links

Mature cpo-miR-1379-5p

Accession MIMAT0047423
Description Cavia porcellus cpo-miR-1379-5p mature miRNA
Sequence 1 - UCAGGCUCUCAGCCCGAGCC - 20
Evidence experimental
Illumina [1]

Mature cpo-miR-1379-3p

Accession MIMAT0047424
Description Cavia porcellus cpo-miR-1379-3p mature miRNA
Sequence 37 - CACGGGCUGCAGCGCCAACGC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344