miRBase entry: cpo-mir-1388

Stem-loop cpo-mir-1388


Accession
MI0038862
Description
Cavia porcellus cpo-mir-1388 precursor miRNA


Sequence

AGGACUGUCCAACCUGAGAAUGuugcaucuccuggucaAUCUCAGGUUUGUCAGCCCGUG
.((.(((.(.(((((((((...(((.(((....))))))))))))))).).))).))...

Structure
--A  A   U C         AUG   c   u 
   GG CUG C AACCUGAGA   uug auc c
   || ||| | |||||||||   ||| |||  
   CC GAC G UUGGACUCU   Aac ugg c
GUG  C   U U         ---   -   u 


Annotation confidence Not enough data
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Genome context
DS562974.1: 424300-424359 [+]

Database links

Mature cpo-miR-1388-5p

Accession MIMAT0047425
Description Cavia porcellus cpo-miR-1388-5p mature miRNA
Sequence 1 - AGGACUGUCCAACCUGAGAAUG - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-1388-3p

Accession MIMAT0047426
Description Cavia porcellus cpo-miR-1388-3p mature miRNA
Sequence 39 - AUCUCAGGUUUGUCAGCCCGUG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344