miRBase entry: cpo-mir-3059

Stem-loop cpo-mir-3059


Accession
MI0038866
Description
Cavia porcellus cpo-mir-3059 precursor miRNA


Sequence

UUUCCUCUCUGCCCCAUAGGGUGUagcucuaacugcCCUCUAGGGAAGAGAAGGUUGG
...(((((((..(((.(((((.((((......)))).)))))))).)))).)))....

Structure
-UUU   -    GC   A     U    cu 
    CCU CUCU  CCC UAGGG GUag  c
    ||| ||||  ||| ||||| ||||   
    GGA GAGA  GGG AUCUC cguc  u
GGUU   A    -A   -     C    aa 


Annotation confidence Not enough data
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Genome context
DS562864.1: 13779749-13779806 [+]

Database links

Mature cpo-miR-3059-5p

Accession MIMAT0047433
Description Cavia porcellus cpo-miR-3059-5p mature miRNA
Sequence 1 - UUUCCUCUCUGCCCCAUAGGGUGU - 24
Evidence experimental
Illumina [1]

Mature cpo-miR-3059-3p

Accession MIMAT0047434
Description Cavia porcellus cpo-miR-3059-3p mature miRNA
Sequence 37 - CCUCUAGGGAAGAGAAGGUUGG - 58
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344