Stem-loop cpo-mir-3085

Accession

MI0038867

Description

Cavia porcellus cpo-mir-3085 precursor miRNA

Sequence

AGGCGCCAUUCUGAGGGCCAGGAGUuugauuaugagucacUCUGGCUGCUAUGGCCCCUC
(((.(((((......((((((.(((..((((...)))))))))))))...))))).))).

Structure

-   C     UCUGAG      G   uu    a 
 AGG GCCAU      GGCCAG AGU  gauu  
 ||| |||||      |||||| |||  |||| u
 UCC CGGUA      UCGGUC Uca  cuga  
C   C     ---UCG      -   --    g 

Annotation confidence Not enough data

Genome context

DS562856.1: 31517490-31517549 [-]

Mature cpo-miR-3085-5p

• Accession: MIMAT0047435
• Description: Cavia porcellus cpo-miR-3085-5p mature miRNA
• Sequence: 1 - AGGCGCCAUUCUGAGGGCCAGGAGU - 25
• Evidence: not_experimental

Mature cpo-miR-3085-3p

• Accession: MIMAT0047436
• Description: Cavia porcellus cpo-miR-3085-3p mature miRNA
• Sequence: 41 - UCUGGCUGCUAUGGCCCCUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344