miRBase entry: dno-mir-19b-1

Stem-loop dno-mir-19b-1

Accession

MI0038913

Description

Dasypus novemcinctus dno-mir-19b-1 precursor miRNA

Literature search

1 open access papers mention dno-mir-19b-1
(6 sentences)

Sequence

AGUUUUGCAGGUUUGCAUCCAGCugugugauauucugcUGUGCAAAUCCAUGCAAAACUGA
(((((((((((((((((..((((.............)))))))))).)).)))))))))..

Structure

--         -  -      UC    ugugu 
  AGUUUUGCA GG UUUGCA  CAGC     g
  ||||||||| || ||||||  ||||     a
  UCAAAACGU CC AAACGU  GUcg     u
AG         A  U      --    ucuua

Annotation confidence Not enough data

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Genome context

JH570327.1: 92928-92988 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from dno-mir-19b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-19b-5p

Accession	MIMAT0047517
Description	Dasypus novemcinctus dno-miR-19b-5p mature miRNA
Sequence	1 - AGUUUUGCAGGUUUGCAUCCAGC - 23
Evidence	not_experimental

Mature dno-miR-19b-3p

Accession	MIMAT0047518
Description	Dasypus novemcinctus dno-miR-19b-3p mature miRNA
Sequence	39 - UGUGCAAAUCCAUGCAAAACUGA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344