miRBase entry: dno-mir-20b

Stem-loop dno-mir-20b


Accession
MI0038916
Description
Dasypus novemcinctus dno-mir-20b precursor miRNA


Sequence

CAAAGUGCUCAUAGUGCAGGUAGuuuuggcauuacucuACUGUAGUGUGGGCACUUUAAGU
.((((((((((((.(((((..(((.........)))...))))).))))))))))))....

Structure
---C            G     -GU   uuu 
    AAAGUGCUCAUA UGCAG   AGu   g
    |||||||||||| |||||   |||   g
    UUUCACGGGUGU AUGUC   uca   c
UGAA            G     Auc   uua 


Annotation confidence Not enough data
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Genome context
JH573198.1: 1052698-1052758 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from dno-mir-20b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-20b-5p

Accession MIMAT0047522
Description Dasypus novemcinctus dno-miR-20b-5p mature miRNA
Sequence 1 - CAAAGUGCUCAUAGUGCAGGUAG - 23
Evidence experimental
Illumina [1]

Mature dno-miR-20b-3p

Accession MIMAT0047523
Description Dasypus novemcinctus dno-miR-20b-3p mature miRNA
Sequence 39 - ACUGUAGUGUGGGCACUUUAAGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344