miRBase entry: dno-mir-30c-1

Stem-loop dno-mir-30c-1


Accession
MI0038936
Description
Dasypus novemcinctus dno-mir-30c-1 precursor miRNA


Sequence

UGUAAACAUCCUACACUCUCAGCUgugagcucaagguggCUGGGAGAGGGUUGUUUACUCC
.(((((((.(((...(((((((((....(((...)))))))))))).))).)))))))...

Structure
--U       U   ACA         guga   c 
   GUAAACA CCU   CUCUCAGCU    gcu  
   ||||||| |||   |||||||||    ||| a
   CAUUUGU GGG   GAGGGUCgg    ugg  
CCU       U   --A         ----   a 


Annotation confidence Not enough data
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Genome context
JH563817.1: 1498919-1498979 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dno-mir-30c-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-30c-5p

Accession MIMAT0047560
Description Dasypus novemcinctus dno-miR-30c-5p mature miRNA
Sequence 1 - UGUAAACAUCCUACACUCUCAGCU - 24
Evidence experimental
Illumina [1]

Mature dno-miR-30c-3p

Accession MIMAT0047561
Description Dasypus novemcinctus dno-miR-30c-3p mature miRNA
Sequence 40 - CUGGGAGAGGGUUGUUUACUCC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344