miRBase entry: dno-mir-106a

Stem-loop dno-mir-106a

Accession

MI0038960

Description

Dasypus novemcinctus dno-mir-106a precursor miRNA

Sequence

AAAAGUGCUUGCAGUGCAGGUAGuuuuugagaucuACUGCAAUGCAAGCACUUCUUAC
..(((((((((((.(((((.(((..........)))))))).))))))))))).....

Structure

---AA           G     G   uuuu 
     AAGUGCUUGCA UGCAG UAG    u
     ||||||||||| ||||| |||     
     UUCACGAACGU ACGUC Auc    g
CAUUC           A     -   uaga

Annotation confidence Not enough data

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Genome context

JH573198.1: 1052307-1052364 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from dno-mir-106a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-106a-5p

Accession	MIMAT0047604
Description	Dasypus novemcinctus dno-miR-106a-5p mature miRNA
Sequence	1 - AAAAGUGCUUGCAGUGCAGGUAG - 23
Evidence	experimental Illumina [1]

Mature dno-miR-106a-3p

Accession	MIMAT0047605
Description	Dasypus novemcinctus dno-miR-106a-3p mature miRNA
Sequence	36 - ACUGCAAUGCAAGCACUUCUUAC - 58
Evidence	not_experimental

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344