miRBase entry: dno-mir-107

Stem-loop dno-mir-107


Accession
MI0038962
Description
Dasypus novemcinctus dno-mir-107 precursor miRNA


Sequence

AGCUUCUUUACAGUGUUGCCUUGuggaauggaguucaAGCAGCAUUGUACAGGGCUAUCAaagcauagagagc
.(((.((((...(((((((((((((.((((..((....))..)))).))))))))......))))))))))))

Structure
A   U    ACA     ------        g    ga  u 
 GCU CUUU   GUGUU      GCCUUGug aaug  gu c
 ||| ||||   |||||      |||||||| ||||  ||  
 cga gaga   uacga      CGGGACAU UUAC  CG a
-   -    ---     aACUAU        G    GA  A 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH568486.1: 886362-886434 [+]

Database links

Mature dno-miR-107-5p

Accession MIMAT0047608
Description Dasypus novemcinctus dno-miR-107-5p mature miRNA
Sequence 1 - AGCUUCUUUACAGUGUUGCCUUG - 23
Evidence experimental
Illumina [1]

Mature dno-miR-107-3p

Accession MIMAT0047609
Description Dasypus novemcinctus dno-miR-107-3p mature miRNA
Sequence 38 - AGCAGCAUUGUACAGGGCUAUCA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344