miRBase entry: dno-mir-188

Stem-loop dno-mir-188


Accession
MI0039019
Description
Dasypus novemcinctus dno-mir-188 precursor miRNA


Sequence

CAUCCCUUGCAUGGUGGAGGGugagcuuucaggaaacccCUCCCACGUGCAGGGUUUGCA
((..(((((((((..((((((....((....))....))))))..)))))))))..))..

Structure
--  UC         GU      ugag  u 
  CA  CCUUGCAUG  GGAGGG    cu u
  ||  |||||||||  ||||||    ||  
  GU  GGGACGUGC  CCUCcc    gg c
AC  UU         AC      caaa  a 


Annotation confidence Not enough data
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Genome context
JH569306.1: 1545145-1545204 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from dno-mir-188
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-188-5p

Accession MIMAT0047711
Description Dasypus novemcinctus dno-miR-188-5p mature miRNA
Sequence 1 - CAUCCCUUGCAUGGUGGAGGG - 21
Evidence experimental
Illumina [1]

Mature dno-miR-188-3p

Accession MIMAT0047712
Description Dasypus novemcinctus dno-miR-188-3p mature miRNA
Sequence 40 - CUCCCACGUGCAGGGUUUGCA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344