miRBase entry: dno-mir-199-1

Stem-loop dno-mir-199-1


Accession
MI0039032
Description
Dasypus novemcinctus dno-mir-199-1 precursor miRNA


Sequence

CCCAGUGUUCAGACUACCUGUUCaggacaaugccguuguACAGUAGUCUGCACAUUGGUUA
.(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...

Structure
--C       U        C   U  --  ac 
   CCAGUGU CAGACUAC UGU Ca  gg  a
   ||||||| |||||||| ||| ||  ||   
   GGUUACA GUCUGAUG ACA gu  cc  a
AUU       C        -   u  ug  gu 


Annotation confidence Not enough data
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Genome context
JH566029.1: 1167422-1167482 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dno-mir-199-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-199-5p

Accession MIMAT0047737
Description Dasypus novemcinctus dno-miR-199-5p mature miRNA
Sequence 1 - CCCAGUGUUCAGACUACCUGUUC - 23
Evidence experimental
Illumina [1]

Mature dno-miR-199-3p

Accession MIMAT0047738
Description Dasypus novemcinctus dno-miR-199-3p mature miRNA
Sequence 40 - ACAGUAGUCUGCACAUUGGUUA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344