miRBase entry: dno-mir-221

Stem-loop dno-mir-221


Accession
MI0039052
Description
Dasypus novemcinctus dno-mir-221 precursor miRNA


Sequence

ACCUGGCAUACAAUGUAGAUUUCUGUguuuguuggacaacAGCUACAUUGUCUGCUGGGUUUC
((((((((.(((((((((....((((((((...)))).))))))))))))).))))))))...

Structure
---        U         AUUU    -    g 
   ACCUGGCA ACAAUGUAG    CUGU guuu  
   |||||||| |||||||||    |||| |||| u
   UGGGUCGU UGUUACAUC    GAca cagg  
CUU        C         ----    a    u 


Annotation confidence Not enough data
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Genome context
JH568173.1: 140066-140128 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dno-mir-221
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-221-5p

Accession MIMAT0047775
Description Dasypus novemcinctus dno-miR-221-5p mature miRNA
Sequence 1 - ACCUGGCAUACAAUGUAGAUUUCUGU - 26
Evidence experimental
Illumina [1]

Mature dno-miR-221-3p

Accession MIMAT0047776
Description Dasypus novemcinctus dno-miR-221-3p mature miRNA
Sequence 41 - AGCUACAUUGUCUGCUGGGUUUC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344