miRBase entry: dno-mir-654

Stem-loop dno-mir-654


Accession
MI0039162
Description
Dasypus novemcinctus dno-mir-654 precursor miRNA


Sequence

AUGGUGGACCGCGGAACAUGUGcuuaauucacgccaUAUGUCUGCCGACCAUCACCU
.((((((.(.(((((.(((((((.........).))))))))))).).))))))...

Structure
--A      A C     A      - uua 
   UGGUGG C GCGGA CAUGUG c   a
   |||||| | ||||| |||||| |   u
   ACUACC G CGUCU GUAUac g   u
UCC      A C     -      c cac 


Annotation confidence Not enough data
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Genome context
JH578221.1: 141458-141514 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from dno-mir-654
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-654-5p

Accession MIMAT0047990
Description Dasypus novemcinctus dno-miR-654-5p mature miRNA
Sequence 1 - AUGGUGGACCGCGGAACAUGUG - 22
Evidence experimental
Illumina [1]

Mature dno-miR-654-3p

Accession MIMAT0047991
Description Dasypus novemcinctus dno-miR-654-3p mature miRNA
Sequence 37 - UAUGUCUGCCGACCAUCACCU - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344