miRBase entry: dno-mir-889

Stem-loop dno-mir-889


Accession
MI0039178
Description
Dasypus novemcinctus dno-mir-889 precursor miRNA


Sequence

AAUGGCUGUCCGUAGUAUGGUCucuauauuuaugaugaUUAAUAUCGGACAACCAUUGU
(((((.((((((..((.(((((((.........)).)))))))..)))))).)))))..

Structure
--     C      UA  A     -  uau 
  AAUGG UGUCCG  GU UGGUC uc   a
  ||||| ||||||  || ||||| ||   u
  UUACC ACAGGC  UA AUUag ag   u
UG     A      UA  -     u  uau 


Annotation confidence Not enough data
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Genome context
JH578221.1: 148479-148537 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from dno-mir-889
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-889-5p

Accession MIMAT0048022
Description Dasypus novemcinctus dno-miR-889-5p mature miRNA
Sequence 1 - AAUGGCUGUCCGUAGUAUGGUC - 22
Evidence experimental
Illumina [1]

Mature dno-miR-889-3p

Accession MIMAT0048023
Description Dasypus novemcinctus dno-miR-889-3p mature miRNA
Sequence 39 - UUAAUAUCGGACAACCAUUGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344