miRBase entry: ocu-mir-15b

Stem-loop ocu-mir-15b


Accession
MI0039222
Description
Oryctolagus cuniculus ocu-mir-15b precursor miRNA


Sequence

UAGCAGCACAUCAUGGUUUACAuaauauagucaagaugCGAAUCAUAAUUUGCUGCUCUA
.(((((((.((.(((((((.(((............))).))))))).)).)))))))...

Structure
--U       C  C       A   aauau 
   AGCAGCA AU AUGGUUU CAu     a
   ||||||| || ||||||| |||      
   UCGUCGU UA UACUAAG gua     g
AUC       U  A       C   gaacu 


Annotation confidence Not enough data
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Genome context
CM000803.1: 54807846-54807905 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-15b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-15b-5p

Accession MIMAT0048103
Description Oryctolagus cuniculus ocu-miR-15b-5p mature miRNA
Sequence 1 - UAGCAGCACAUCAUGGUUUACA - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-15b-3p

Accession MIMAT0048104
Description Oryctolagus cuniculus ocu-miR-15b-3p mature miRNA
Sequence 39 - CGAAUCAUAAUUUGCUGCUCUA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344