Stem-loop ocu-mir-29c

Accession

MI0039246

Description

Oryctolagus cuniculus ocu-mir-29c precursor miRNA

Literature search

2 open access papers mention ocu-mir-29c
(2 sentences)

Sequence

ACCGAUUUCUCCUGGUGUUCAGAgucuguuuuugucUAGCACCAUUUGAAAUCGGUUA
(((((((((...(((((((.(((...........))))))))))...)))))))))..

Structure

--         UCC       C   gucu 
  ACCGAUUUC   UGGUGUU AGA    g
  |||||||||   ||||||| |||    u
  UGGCUAAAG   ACCACGA Ucu    u
AU         UUU       -   guuu 

Annotation confidence Not enough data

Genome context

CM000805.1: 64850350-64850407 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-29c

Mature ocu-miR-29c-5p

• Accession: MIMAT0048148
• Description: Oryctolagus cuniculus ocu-miR-29c-5p mature miRNA
• Sequence: 1 - ACCGAUUUCUCCUGGUGUUCAGA - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-29c-3p

• Accession: MIMAT0048149
• Description: Oryctolagus cuniculus ocu-miR-29c-3p mature miRNA
• Sequence: 37 - UAGCACCAUUUGAAAUCGGUUA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344