miRBase entry: ocu-mir-101-1

Stem-loop ocu-mir-101-1


Accession
MI0039266
Description
Oryctolagus cuniculus ocu-mir-101-1 precursor miRNA


Sequence

UCAGUUAUCACAGUGCUGAUGCUguccauucuaaaggUACAGUACUGUGAUAACUGAAG
((((((((((((((((((.((((............))))))))))))))))))))))..

Structure
--                  A    gucca 
  UCAGUUAUCACAGUGCUG UGCU     u
  |||||||||||||||||| ||||      
  AGUCAAUAGUGUCAUGAC AUgg     u
GA                  -    aaauc 


Annotation confidence Not enough data
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Genome context
CM000802.1: 101340538-101340596 [+]

Database links

Mature ocu-miR-101-5p

Accession MIMAT0048186
Description Oryctolagus cuniculus ocu-miR-101-5p mature miRNA
Sequence 1 - UCAGUUAUCACAGUGCUGAUGCU - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-101-3p

Accession MIMAT0048187
Description Oryctolagus cuniculus ocu-miR-101-3p mature miRNA
Sequence 38 - UACAGUACUGUGAUAACUGAAG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344