Stem-loop ocu-mir-127

Accession

MI0039280

Description

Oryctolagus cuniculus ocu-mir-127 precursor miRNA

Literature search

1 open access papers mention ocu-mir-127
(3 sentences)

Sequence

CUGAAGCUCAGAGGGCUCUGAUUcagaaagaucaUCGGAUCCGUCUGAGCUUGGCU
.(.(((((((((.((.((((((((.....))..)))))).)).))))))))).)..

Structure

-C G         G  C      --  a 
  U AAGCUCAGA GG UCUGAU  Uc g
  | ||||||||| || ||||||  || a
  G UUCGAGUCU CC AGGCUa  ag a
UC G         G  U      cu  a 

Annotation confidence Not enough data

Genome context

GL019048.1: 7903-7958 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ocu-mir-127

Mature ocu-miR-127-5p

• Accession: MIMAT0048208
• Description: Oryctolagus cuniculus ocu-miR-127-5p mature miRNA
• Sequence: 1 - CUGAAGCUCAGAGGGCUCUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-127-3p

• Accession: MIMAT0048209
• Description: Oryctolagus cuniculus ocu-miR-127-3p mature miRNA
• Sequence: 35 - UCGGAUCCGUCUGAGCUUGGCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344