miRBase entry: ocu-mir-135a-1

Stem-loop ocu-mir-135a-1


Accession
MI0039290
Description
Oryctolagus cuniculus ocu-mir-135a-1 precursor miRNA


Sequence

UAUGGCUUUUUAUUCCUAUGUGAuucuacugcucacucAUAUAGGGAUUGGAGCCGUGGC
(((((((((..((((((((((((.............)))))))))))).)))))))))..

Structure
--         UU            uucua 
  UAUGGCUUU  AUUCCUAUGUGA     c
  |||||||||  ||||||||||||     u
  GUGCCGAGG  UAGGGAUAUAcu     g
CG         -U            cacuc 


Annotation confidence Not enough data
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Genome context
CM000798.1: 19378424-19378483 [-]

Database links

Mature ocu-miR-135a-5p

Accession MIMAT0048227
Description Oryctolagus cuniculus ocu-miR-135a-5p mature miRNA
Sequence 1 - UAUGGCUUUUUAUUCCUAUGUGA - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-135a-3p

Accession MIMAT0048228
Description Oryctolagus cuniculus ocu-miR-135a-3p mature miRNA
Sequence 39 - AUAUAGGGAUUGGAGCCGUGGC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344