miRBase entry: ocu-mir-183

Stem-loop ocu-mir-183


Accession
MI0039322
Description
Oryctolagus cuniculus ocu-mir-183 precursor miRNA


Sequence

UAUGGCACUGGUAGAAUUCACUgugaacagucucggucagUGAAUUACCGAAGGGCCAUAAA
((((((.((((((..(((((((((((......)))..))))))))))))..)).))))))..

Structure
--      A  --    GA        --   ac 
  UAUGGC CU  GGUA  AUUCACUg  uga  a
  |||||| ||  ||||  ||||||||  |||   
  AUACCG GA  CCAU  UAAGUgac  gcu  g
AA      G  AG    --        ug   cu 


Annotation confidence Not enough data
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Genome context
CM000796.1: 14826894-14826955 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ocu-mir-183
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-183-5p

Accession MIMAT0048287
Description Oryctolagus cuniculus ocu-miR-183-5p mature miRNA
Sequence 1 - UAUGGCACUGGUAGAAUUCACU - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-183-3p

Accession MIMAT0048288
Description Oryctolagus cuniculus ocu-miR-183-3p mature miRNA
Sequence 41 - UGAAUUACCGAAGGGCCAUAAA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344